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@ -1,942 +0,0 @@
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local({
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# the requested version of renv
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version <- "0.15.5"
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# the project directory
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project <- getwd()
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# figure out whether the autoloader is enabled
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enabled <- local({
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# first, check config option
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override <- getOption("renv.config.autoloader.enabled")
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if (!is.null(override))
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return(override)
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# next, check environment variables
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# TODO: prefer using the configuration one in the future
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envvars <- c(
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"RENV_CONFIG_AUTOLOADER_ENABLED",
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"RENV_AUTOLOADER_ENABLED",
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"RENV_ACTIVATE_PROJECT"
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)
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for (envvar in envvars) {
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envval <- Sys.getenv(envvar, unset = NA)
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if (!is.na(envval))
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return(tolower(envval) %in% c("true", "t", "1"))
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}
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# enable by default
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TRUE
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})
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if (!enabled)
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return(FALSE)
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# avoid recursion
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if (identical(getOption("renv.autoloader.running"), TRUE)) {
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warning("ignoring recursive attempt to run renv autoloader")
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return(invisible(TRUE))
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}
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# signal that we're loading renv during R startup
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options(renv.autoloader.running = TRUE)
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on.exit(options(renv.autoloader.running = NULL), add = TRUE)
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# signal that we've consented to use renv
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options(renv.consent = TRUE)
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# load the 'utils' package eagerly -- this ensures that renv shims, which
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# mask 'utils' packages, will come first on the search path
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library(utils, lib.loc = .Library)
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# unload renv if it's already been loaded
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if ("renv" %in% loadedNamespaces())
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unloadNamespace("renv")
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# load bootstrap tools
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`%||%` <- function(x, y) {
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if (is.environment(x) || length(x)) x else y
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}
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bootstrap <- function(version, library) {
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# attempt to download renv
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tarball <- tryCatch(renv_bootstrap_download(version), error = identity)
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if (inherits(tarball, "error"))
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stop("failed to download renv ", version)
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# now attempt to install
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status <- tryCatch(renv_bootstrap_install(version, tarball, library), error = identity)
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if (inherits(status, "error"))
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stop("failed to install renv ", version)
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}
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renv_bootstrap_tests_running <- function() {
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getOption("renv.tests.running", default = FALSE)
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}
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renv_bootstrap_repos <- function() {
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# check for repos override
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repos <- Sys.getenv("RENV_CONFIG_REPOS_OVERRIDE", unset = NA)
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if (!is.na(repos))
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return(repos)
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# check for lockfile repositories
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repos <- tryCatch(renv_bootstrap_repos_lockfile(), error = identity)
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if (!inherits(repos, "error") && length(repos))
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return(repos)
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# if we're testing, re-use the test repositories
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if (renv_bootstrap_tests_running())
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return(getOption("renv.tests.repos"))
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# retrieve current repos
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repos <- getOption("repos")
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# ensure @CRAN@ entries are resolved
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repos[repos == "@CRAN@"] <- getOption(
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"renv.repos.cran",
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"https://cloud.r-project.org"
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)
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# add in renv.bootstrap.repos if set
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default <- c(FALLBACK = "https://cloud.r-project.org")
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extra <- getOption("renv.bootstrap.repos", default = default)
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repos <- c(repos, extra)
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# remove duplicates that might've snuck in
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dupes <- duplicated(repos) | duplicated(names(repos))
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repos[!dupes]
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}
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renv_bootstrap_repos_lockfile <- function() {
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lockpath <- Sys.getenv("RENV_PATHS_LOCKFILE", unset = "renv.lock")
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if (!file.exists(lockpath))
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return(NULL)
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lockfile <- tryCatch(renv_json_read(lockpath), error = identity)
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if (inherits(lockfile, "error")) {
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warning(lockfile)
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return(NULL)
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}
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repos <- lockfile$R$Repositories
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if (length(repos) == 0)
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return(NULL)
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keys <- vapply(repos, `[[`, "Name", FUN.VALUE = character(1))
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vals <- vapply(repos, `[[`, "URL", FUN.VALUE = character(1))
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names(vals) <- keys
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return(vals)
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}
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renv_bootstrap_download <- function(version) {
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# if the renv version number has 4 components, assume it must
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# be retrieved via github
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nv <- numeric_version(version)
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components <- unclass(nv)[[1]]
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# if this appears to be a development version of 'renv', we'll
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# try to restore from github
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dev <- length(components) == 4L
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# begin collecting different methods for finding renv
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methods <- c(
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renv_bootstrap_download_tarball,
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if (dev)
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renv_bootstrap_download_github
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else c(
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renv_bootstrap_download_cran_latest,
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renv_bootstrap_download_cran_archive
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)
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)
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for (method in methods) {
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path <- tryCatch(method(version), error = identity)
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if (is.character(path) && file.exists(path))
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return(path)
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}
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stop("failed to download renv ", version)
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}
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renv_bootstrap_download_impl <- function(url, destfile) {
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mode <- "wb"
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# https://bugs.r-project.org/bugzilla/show_bug.cgi?id=17715
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fixup <-
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Sys.info()[["sysname"]] == "Windows" &&
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substring(url, 1L, 5L) == "file:"
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if (fixup)
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mode <- "w+b"
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utils::download.file(
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url = url,
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destfile = destfile,
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mode = mode,
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quiet = TRUE
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)
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}
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renv_bootstrap_download_cran_latest <- function(version) {
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spec <- renv_bootstrap_download_cran_latest_find(version)
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message("* Downloading renv ", version, " ... ", appendLF = FALSE)
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type <- spec$type
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repos <- spec$repos
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info <- tryCatch(
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utils::download.packages(
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pkgs = "renv",
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destdir = tempdir(),
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repos = repos,
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type = type,
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quiet = TRUE
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),
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condition = identity
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)
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if (inherits(info, "condition")) {
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message("FAILED")
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return(FALSE)
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}
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# report success and return
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message("OK (downloaded ", type, ")")
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info[1, 2]
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}
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renv_bootstrap_download_cran_latest_find <- function(version) {
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# check whether binaries are supported on this system
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binary <-
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getOption("renv.bootstrap.binary", default = TRUE) &&
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!identical(.Platform$pkgType, "source") &&
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!identical(getOption("pkgType"), "source") &&
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Sys.info()[["sysname"]] %in% c("Darwin", "Windows")
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types <- c(if (binary) "binary", "source")
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# iterate over types + repositories
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for (type in types) {
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for (repos in renv_bootstrap_repos()) {
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# retrieve package database
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db <- tryCatch(
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as.data.frame(
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utils::available.packages(type = type, repos = repos),
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stringsAsFactors = FALSE
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),
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error = identity
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)
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if (inherits(db, "error"))
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next
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# check for compatible entry
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entry <- db[db$Package %in% "renv" & db$Version %in% version, ]
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if (nrow(entry) == 0)
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next
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# found it; return spec to caller
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spec <- list(entry = entry, type = type, repos = repos)
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return(spec)
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}
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}
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# if we got here, we failed to find renv
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fmt <- "renv %s is not available from your declared package repositories"
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stop(sprintf(fmt, version))
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}
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renv_bootstrap_download_cran_archive <- function(version) {
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name <- sprintf("renv_%s.tar.gz", version)
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repos <- renv_bootstrap_repos()
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urls <- file.path(repos, "src/contrib/Archive/renv", name)
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destfile <- file.path(tempdir(), name)
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message("* Downloading renv ", version, " ... ", appendLF = FALSE)
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for (url in urls) {
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status <- tryCatch(
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renv_bootstrap_download_impl(url, destfile),
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condition = identity
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)
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if (identical(status, 0L)) {
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message("OK")
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return(destfile)
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}
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}
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message("FAILED")
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return(FALSE)
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}
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renv_bootstrap_download_tarball <- function(version) {
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# if the user has provided the path to a tarball via
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# an environment variable, then use it
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tarball <- Sys.getenv("RENV_BOOTSTRAP_TARBALL", unset = NA)
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if (is.na(tarball))
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return()
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# allow directories
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info <- file.info(tarball, extra_cols = FALSE)
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if (identical(info$isdir, TRUE)) {
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name <- sprintf("renv_%s.tar.gz", version)
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tarball <- file.path(tarball, name)
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}
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# bail if it doesn't exist
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if (!file.exists(tarball)) {
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# let the user know we weren't able to honour their request
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fmt <- "* RENV_BOOTSTRAP_TARBALL is set (%s) but does not exist."
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msg <- sprintf(fmt, tarball)
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warning(msg)
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# bail
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return()
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}
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fmt <- "* Bootstrapping with tarball at path '%s'."
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msg <- sprintf(fmt, tarball)
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message(msg)
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tarball
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}
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renv_bootstrap_download_github <- function(version) {
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enabled <- Sys.getenv("RENV_BOOTSTRAP_FROM_GITHUB", unset = "TRUE")
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if (!identical(enabled, "TRUE"))
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return(FALSE)
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# prepare download options
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pat <- Sys.getenv("GITHUB_PAT")
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if (nzchar(Sys.which("curl")) && nzchar(pat)) {
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fmt <- "--location --fail --header \"Authorization: token %s\""
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extra <- sprintf(fmt, pat)
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saved <- options("download.file.method", "download.file.extra")
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options(download.file.method = "curl", download.file.extra = extra)
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on.exit(do.call(base::options, saved), add = TRUE)
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} else if (nzchar(Sys.which("wget")) && nzchar(pat)) {
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fmt <- "--header=\"Authorization: token %s\""
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|
|
|
extra <- sprintf(fmt, pat)
|
|
|
|
|
saved <- options("download.file.method", "download.file.extra")
|
|
|
|
|
options(download.file.method = "wget", download.file.extra = extra)
|
|
|
|
|
on.exit(do.call(base::options, saved), add = TRUE)
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
message("* Downloading renv ", version, " from GitHub ... ", appendLF = FALSE)
|
|
|
|
|
|
|
|
|
|
url <- file.path("https://api.github.com/repos/rstudio/renv/tarball", version)
|
|
|
|
|
name <- sprintf("renv_%s.tar.gz", version)
|
|
|
|
|
destfile <- file.path(tempdir(), name)
|
|
|
|
|
|
|
|
|
|
status <- tryCatch(
|
|
|
|
|
renv_bootstrap_download_impl(url, destfile),
|
|
|
|
|
condition = identity
|
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
if (!identical(status, 0L)) {
|
|
|
|
|
message("FAILED")
|
|
|
|
|
return(FALSE)
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
message("OK")
|
|
|
|
|
return(destfile)
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_install <- function(version, tarball, library) {
|
|
|
|
|
|
|
|
|
|
# attempt to install it into project library
|
|
|
|
|
message("* Installing renv ", version, " ... ", appendLF = FALSE)
|
|
|
|
|
dir.create(library, showWarnings = FALSE, recursive = TRUE)
|
|
|
|
|
|
|
|
|
|
# invoke using system2 so we can capture and report output
|
|
|
|
|
bin <- R.home("bin")
|
|
|
|
|
exe <- if (Sys.info()[["sysname"]] == "Windows") "R.exe" else "R"
|
|
|
|
|
r <- file.path(bin, exe)
|
|
|
|
|
|
|
|
|
|
args <- c(
|
|
|
|
|
"--vanilla", "CMD", "INSTALL", "--no-multiarch",
|
|
|
|
|
"-l", shQuote(path.expand(library)),
|
|
|
|
|
shQuote(path.expand(tarball))
|
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
output <- system2(r, args, stdout = TRUE, stderr = TRUE)
|
|
|
|
|
message("Done!")
|
|
|
|
|
|
|
|
|
|
# check for successful install
|
|
|
|
|
status <- attr(output, "status")
|
|
|
|
|
if (is.numeric(status) && !identical(status, 0L)) {
|
|
|
|
|
header <- "Error installing renv:"
|
|
|
|
|
lines <- paste(rep.int("=", nchar(header)), collapse = "")
|
|
|
|
|
text <- c(header, lines, output)
|
|
|
|
|
writeLines(text, con = stderr())
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
status
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_platform_prefix <- function() {
|
|
|
|
|
|
|
|
|
|
# construct version prefix
|
|
|
|
|
version <- paste(R.version$major, R.version$minor, sep = ".")
|
|
|
|
|
prefix <- paste("R", numeric_version(version)[1, 1:2], sep = "-")
|
|
|
|
|
|
|
|
|
|
# include SVN revision for development versions of R
|
|
|
|
|
# (to avoid sharing platform-specific artefacts with released versions of R)
|
|
|
|
|
devel <-
|
|
|
|
|
identical(R.version[["status"]], "Under development (unstable)") ||
|
|
|
|
|
identical(R.version[["nickname"]], "Unsuffered Consequences")
|
|
|
|
|
|
|
|
|
|
if (devel)
|
|
|
|
|
prefix <- paste(prefix, R.version[["svn rev"]], sep = "-r")
|
|
|
|
|
|
|
|
|
|
# build list of path components
|
|
|
|
|
components <- c(prefix, R.version$platform)
|
|
|
|
|
|
|
|
|
|
# include prefix if provided by user
|
|
|
|
|
prefix <- renv_bootstrap_platform_prefix_impl()
|
|
|
|
|
if (!is.na(prefix) && nzchar(prefix))
|
|
|
|
|
components <- c(prefix, components)
|
|
|
|
|
|
|
|
|
|
# build prefix
|
|
|
|
|
paste(components, collapse = "/")
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_platform_prefix_impl <- function() {
|
|
|
|
|
|
|
|
|
|
# if an explicit prefix has been supplied, use it
|
|
|
|
|
prefix <- Sys.getenv("RENV_PATHS_PREFIX", unset = NA)
|
|
|
|
|
if (!is.na(prefix))
|
|
|
|
|
return(prefix)
|
|
|
|
|
|
|
|
|
|
# if the user has requested an automatic prefix, generate it
|
|
|
|
|
auto <- Sys.getenv("RENV_PATHS_PREFIX_AUTO", unset = NA)
|
|
|
|
|
if (auto %in% c("TRUE", "True", "true", "1"))
|
|
|
|
|
return(renv_bootstrap_platform_prefix_auto())
|
|
|
|
|
|
|
|
|
|
# empty string on failure
|
|
|
|
|
""
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_platform_prefix_auto <- function() {
|
|
|
|
|
|
|
|
|
|
prefix <- tryCatch(renv_bootstrap_platform_os(), error = identity)
|
|
|
|
|
if (inherits(prefix, "error") || prefix %in% "unknown") {
|
|
|
|
|
|
|
|
|
|
msg <- paste(
|
|
|
|
|
"failed to infer current operating system",
|
|
|
|
|
"please file a bug report at https://github.com/rstudio/renv/issues",
|
|
|
|
|
sep = "; "
|
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
warning(msg)
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
prefix
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_platform_os <- function() {
|
|
|
|
|
|
|
|
|
|
sysinfo <- Sys.info()
|
|
|
|
|
sysname <- sysinfo[["sysname"]]
|
|
|
|
|
|
|
|
|
|
# handle Windows + macOS up front
|
|
|
|
|
if (sysname == "Windows")
|
|
|
|
|
return("windows")
|
|
|
|
|
else if (sysname == "Darwin")
|
|
|
|
|
return("macos")
|
|
|
|
|
|
|
|
|
|
# check for os-release files
|
|
|
|
|
for (file in c("/etc/os-release", "/usr/lib/os-release"))
|
|
|
|
|
if (file.exists(file))
|
|
|
|
|
return(renv_bootstrap_platform_os_via_os_release(file, sysinfo))
|
|
|
|
|
|
|
|
|
|
# check for redhat-release files
|
|
|
|
|
if (file.exists("/etc/redhat-release"))
|
|
|
|
|
return(renv_bootstrap_platform_os_via_redhat_release())
|
|
|
|
|
|
|
|
|
|
"unknown"
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_platform_os_via_os_release <- function(file, sysinfo) {
|
|
|
|
|
|
|
|
|
|
# read /etc/os-release
|
|
|
|
|
release <- utils::read.table(
|
|
|
|
|
file = file,
|
|
|
|
|
sep = "=",
|
|
|
|
|
quote = c("\"", "'"),
|
|
|
|
|
col.names = c("Key", "Value"),
|
|
|
|
|
comment.char = "#",
|
|
|
|
|
stringsAsFactors = FALSE
|
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
vars <- as.list(release$Value)
|
|
|
|
|
names(vars) <- release$Key
|
|
|
|
|
|
|
|
|
|
# get os name
|
|
|
|
|
os <- tolower(sysinfo[["sysname"]])
|
|
|
|
|
|
|
|
|
|
# read id
|
|
|
|
|
id <- "unknown"
|
|
|
|
|
for (field in c("ID", "ID_LIKE")) {
|
|
|
|
|
if (field %in% names(vars) && nzchar(vars[[field]])) {
|
|
|
|
|
id <- vars[[field]]
|
|
|
|
|
break
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
# read version
|
|
|
|
|
version <- "unknown"
|
|
|
|
|
for (field in c("UBUNTU_CODENAME", "VERSION_CODENAME", "VERSION_ID", "BUILD_ID")) {
|
|
|
|
|
if (field %in% names(vars) && nzchar(vars[[field]])) {
|
|
|
|
|
version <- vars[[field]]
|
|
|
|
|
break
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
# join together
|
|
|
|
|
paste(c(os, id, version), collapse = "-")
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_platform_os_via_redhat_release <- function() {
|
|
|
|
|
|
|
|
|
|
# read /etc/redhat-release
|
|
|
|
|
contents <- readLines("/etc/redhat-release", warn = FALSE)
|
|
|
|
|
|
|
|
|
|
# infer id
|
|
|
|
|
id <- if (grepl("centos", contents, ignore.case = TRUE))
|
|
|
|
|
"centos"
|
|
|
|
|
else if (grepl("redhat", contents, ignore.case = TRUE))
|
|
|
|
|
"redhat"
|
|
|
|
|
else
|
|
|
|
|
"unknown"
|
|
|
|
|
|
|
|
|
|
# try to find a version component (very hacky)
|
|
|
|
|
version <- "unknown"
|
|
|
|
|
|
|
|
|
|
parts <- strsplit(contents, "[[:space:]]")[[1L]]
|
|
|
|
|
for (part in parts) {
|
|
|
|
|
|
|
|
|
|
nv <- tryCatch(numeric_version(part), error = identity)
|
|
|
|
|
if (inherits(nv, "error"))
|
|
|
|
|
next
|
|
|
|
|
|
|
|
|
|
version <- nv[1, 1]
|
|
|
|
|
break
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
paste(c("linux", id, version), collapse = "-")
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_library_root_name <- function(project) {
|
|
|
|
|
|
|
|
|
|
# use project name as-is if requested
|
|
|
|
|
asis <- Sys.getenv("RENV_PATHS_LIBRARY_ROOT_ASIS", unset = "FALSE")
|
|
|
|
|
if (asis)
|
|
|
|
|
return(basename(project))
|
|
|
|
|
|
|
|
|
|
# otherwise, disambiguate based on project's path
|
|
|
|
|
id <- substring(renv_bootstrap_hash_text(project), 1L, 8L)
|
|
|
|
|
paste(basename(project), id, sep = "-")
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_library_root <- function(project) {
|
|
|
|
|
|
|
|
|
|
prefix <- renv_bootstrap_profile_prefix()
|
|
|
|
|
|
|
|
|
|
path <- Sys.getenv("RENV_PATHS_LIBRARY", unset = NA)
|
|
|
|
|
if (!is.na(path))
|
|
|
|
|
return(paste(c(path, prefix), collapse = "/"))
|
|
|
|
|
|
|
|
|
|
path <- renv_bootstrap_library_root_impl(project)
|
|
|
|
|
if (!is.null(path)) {
|
|
|
|
|
name <- renv_bootstrap_library_root_name(project)
|
|
|
|
|
return(paste(c(path, prefix, name), collapse = "/"))
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_paths_renv("library", project = project)
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_library_root_impl <- function(project) {
|
|
|
|
|
|
|
|
|
|
root <- Sys.getenv("RENV_PATHS_LIBRARY_ROOT", unset = NA)
|
|
|
|
|
if (!is.na(root))
|
|
|
|
|
return(root)
|
|
|
|
|
|
|
|
|
|
type <- renv_bootstrap_project_type(project)
|
|
|
|
|
if (identical(type, "package")) {
|
|
|
|
|
userdir <- renv_bootstrap_user_dir()
|
|
|
|
|
return(file.path(userdir, "library"))
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_validate_version <- function(version) {
|
|
|
|
|
|
|
|
|
|
loadedversion <- utils::packageDescription("renv", fields = "Version")
|
|
|
|
|
if (version == loadedversion)
|
|
|
|
|
return(TRUE)
|
|
|
|
|
|
|
|
|
|
# assume four-component versions are from GitHub; three-component
|
|
|
|
|
# versions are from CRAN
|
|
|
|
|
components <- strsplit(loadedversion, "[.-]")[[1]]
|
|
|
|
|
remote <- if (length(components) == 4L)
|
|
|
|
|
paste("rstudio/renv", loadedversion, sep = "@")
|
|
|
|
|
else
|
|
|
|
|
paste("renv", loadedversion, sep = "@")
|
|
|
|
|
|
|
|
|
|
fmt <- paste(
|
|
|
|
|
"renv %1$s was loaded from project library, but this project is configured to use renv %2$s.",
|
|
|
|
|
"Use `renv::record(\"%3$s\")` to record renv %1$s in the lockfile.",
|
|
|
|
|
"Use `renv::restore(packages = \"renv\")` to install renv %2$s into the project library.",
|
|
|
|
|
sep = "\n"
|
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
msg <- sprintf(fmt, loadedversion, version, remote)
|
|
|
|
|
warning(msg, call. = FALSE)
|
|
|
|
|
|
|
|
|
|
FALSE
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_hash_text <- function(text) {
|
|
|
|
|
|
|
|
|
|
hashfile <- tempfile("renv-hash-")
|
|
|
|
|
on.exit(unlink(hashfile), add = TRUE)
|
|
|
|
|
|
|
|
|
|
writeLines(text, con = hashfile)
|
|
|
|
|
tools::md5sum(hashfile)
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_load <- function(project, libpath, version) {
|
|
|
|
|
|
|
|
|
|
# try to load renv from the project library
|
|
|
|
|
if (!requireNamespace("renv", lib.loc = libpath, quietly = TRUE))
|
|
|
|
|
return(FALSE)
|
|
|
|
|
|
|
|
|
|
# warn if the version of renv loaded does not match
|
|
|
|
|
renv_bootstrap_validate_version(version)
|
|
|
|
|
|
|
|
|
|
# load the project
|
|
|
|
|
renv::load(project)
|
|
|
|
|
|
|
|
|
|
TRUE
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_profile_load <- function(project) {
|
|
|
|
|
|
|
|
|
|
# if RENV_PROFILE is already set, just use that
|
|
|
|
|
profile <- Sys.getenv("RENV_PROFILE", unset = NA)
|
|
|
|
|
if (!is.na(profile) && nzchar(profile))
|
|
|
|
|
return(profile)
|
|
|
|
|
|
|
|
|
|
# check for a profile file (nothing to do if it doesn't exist)
|
|
|
|
|
path <- renv_bootstrap_paths_renv("profile", profile = FALSE)
|
|
|
|
|
if (!file.exists(path))
|
|
|
|
|
return(NULL)
|
|
|
|
|
|
|
|
|
|
# read the profile, and set it if it exists
|
|
|
|
|
contents <- readLines(path, warn = FALSE)
|
|
|
|
|
if (length(contents) == 0L)
|
|
|
|
|
return(NULL)
|
|
|
|
|
|
|
|
|
|
# set RENV_PROFILE
|
|
|
|
|
profile <- contents[[1L]]
|
|
|
|
|
if (!profile %in% c("", "default"))
|
|
|
|
|
Sys.setenv(RENV_PROFILE = profile)
|
|
|
|
|
|
|
|
|
|
profile
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_profile_prefix <- function() {
|
|
|
|
|
profile <- renv_bootstrap_profile_get()
|
|
|
|
|
if (!is.null(profile))
|
|
|
|
|
return(file.path("profiles", profile, "renv"))
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_profile_get <- function() {
|
|
|
|
|
profile <- Sys.getenv("RENV_PROFILE", unset = "")
|
|
|
|
|
renv_bootstrap_profile_normalize(profile)
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_profile_set <- function(profile) {
|
|
|
|
|
profile <- renv_bootstrap_profile_normalize(profile)
|
|
|
|
|
if (is.null(profile))
|
|
|
|
|
Sys.unsetenv("RENV_PROFILE")
|
|
|
|
|
else
|
|
|
|
|
Sys.setenv(RENV_PROFILE = profile)
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_profile_normalize <- function(profile) {
|
|
|
|
|
|
|
|
|
|
if (is.null(profile) || profile %in% c("", "default"))
|
|
|
|
|
return(NULL)
|
|
|
|
|
|
|
|
|
|
profile
|
|
|
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|
|
|
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|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_path_absolute <- function(path) {
|
|
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|
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|
|
substr(path, 1L, 1L) %in% c("~", "/", "\\") || (
|
|
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|
|
substr(path, 1L, 1L) %in% c(letters, LETTERS) &&
|
|
|
|
|
substr(path, 2L, 3L) %in% c(":/", ":\\")
|
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_paths_renv <- function(..., profile = TRUE, project = NULL) {
|
|
|
|
|
renv <- Sys.getenv("RENV_PATHS_RENV", unset = "renv")
|
|
|
|
|
root <- if (renv_bootstrap_path_absolute(renv)) NULL else project
|
|
|
|
|
prefix <- if (profile) renv_bootstrap_profile_prefix()
|
|
|
|
|
components <- c(root, renv, prefix, ...)
|
|
|
|
|
paste(components, collapse = "/")
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_project_type <- function(path) {
|
|
|
|
|
|
|
|
|
|
descpath <- file.path(path, "DESCRIPTION")
|
|
|
|
|
if (!file.exists(descpath))
|
|
|
|
|
return("unknown")
|
|
|
|
|
|
|
|
|
|
desc <- tryCatch(
|
|
|
|
|
read.dcf(descpath, all = TRUE),
|
|
|
|
|
error = identity
|
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
if (inherits(desc, "error"))
|
|
|
|
|
return("unknown")
|
|
|
|
|
|
|
|
|
|
type <- desc$Type
|
|
|
|
|
if (!is.null(type))
|
|
|
|
|
return(tolower(type))
|
|
|
|
|
|
|
|
|
|
package <- desc$Package
|
|
|
|
|
if (!is.null(package))
|
|
|
|
|
return("package")
|
|
|
|
|
|
|
|
|
|
"unknown"
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_user_dir <- function() {
|
|
|
|
|
dir <- renv_bootstrap_user_dir_impl()
|
|
|
|
|
path.expand(chartr("\\", "/", dir))
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_bootstrap_user_dir_impl <- function() {
|
|
|
|
|
|
|
|
|
|
# use local override if set
|
|
|
|
|
override <- getOption("renv.userdir.override")
|
|
|
|
|
if (!is.null(override))
|
|
|
|
|
return(override)
|
|
|
|
|
|
|
|
|
|
# use R_user_dir if available
|
|
|
|
|
tools <- asNamespace("tools")
|
|
|
|
|
if (is.function(tools$R_user_dir))
|
|
|
|
|
return(tools$R_user_dir("renv", "cache"))
|
|
|
|
|
|
|
|
|
|
# try using our own backfill for older versions of R
|
|
|
|
|
envvars <- c("R_USER_CACHE_DIR", "XDG_CACHE_HOME")
|
|
|
|
|
for (envvar in envvars) {
|
|
|
|
|
root <- Sys.getenv(envvar, unset = NA)
|
|
|
|
|
if (!is.na(root))
|
|
|
|
|
return(file.path(root, "R/renv"))
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
# use platform-specific default fallbacks
|
|
|
|
|
if (Sys.info()[["sysname"]] == "Windows")
|
|
|
|
|
file.path(Sys.getenv("LOCALAPPDATA"), "R/cache/R/renv")
|
|
|
|
|
else if (Sys.info()[["sysname"]] == "Darwin")
|
|
|
|
|
"~/Library/Caches/org.R-project.R/R/renv"
|
|
|
|
|
else
|
|
|
|
|
"~/.cache/R/renv"
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
renv_json_read <- function(file = NULL, text = NULL) {
|
|
|
|
|
|
|
|
|
|
text <- paste(text %||% read(file), collapse = "\n")
|
|
|
|
|
|
|
|
|
|
# find strings in the JSON
|
|
|
|
|
pattern <- '["](?:(?:\\\\.)|(?:[^"\\\\]))*?["]'
|
|
|
|
|
locs <- gregexpr(pattern, text, perl = TRUE)[[1]]
|
|
|
|
|
|
|
|
|
|
# if any are found, replace them with placeholders
|
|
|
|
|
replaced <- text
|
|
|
|
|
strings <- character()
|
|
|
|
|
replacements <- character()
|
|
|
|
|
|
|
|
|
|
if (!identical(c(locs), -1L)) {
|
|
|
|
|
|
|
|
|
|
# get the string values
|
|
|
|
|
starts <- locs
|
|
|
|
|
ends <- locs + attr(locs, "match.length") - 1L
|
|
|
|
|
strings <- substring(text, starts, ends)
|
|
|
|
|
|
|
|
|
|
# only keep those requiring escaping
|
|
|
|
|
strings <- grep("[[\\]{}:]", strings, perl = TRUE, value = TRUE)
|
|
|
|
|
|
|
|
|
|
# compute replacements
|
|
|
|
|
replacements <- sprintf('"\032%i\032"', seq_along(strings))
|
|
|
|
|
|
|
|
|
|
# replace the strings
|
|
|
|
|
mapply(function(string, replacement) {
|
|
|
|
|
replaced <<- sub(string, replacement, replaced, fixed = TRUE)
|
|
|
|
|
}, strings, replacements)
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
# transform the JSON into something the R parser understands
|
|
|
|
|
transformed <- replaced
|
|
|
|
|
transformed <- gsub("[[{]", "list(", transformed)
|
|
|
|
|
transformed <- gsub("[]}]", ")", transformed)
|
|
|
|
|
transformed <- gsub(":", "=", transformed, fixed = TRUE)
|
|
|
|
|
text <- paste(transformed, collapse = "\n")
|
|
|
|
|
|
|
|
|
|
# parse it
|
|
|
|
|
json <- parse(text = text, keep.source = FALSE, srcfile = NULL)[[1L]]
|
|
|
|
|
|
|
|
|
|
# construct map between source strings, replaced strings
|
|
|
|
|
map <- as.character(parse(text = strings))
|
|
|
|
|
names(map) <- as.character(parse(text = replacements))
|
|
|
|
|
|
|
|
|
|
# convert to list
|
|
|
|
|
map <- as.list(map)
|
|
|
|
|
|
|
|
|
|
# remap strings in object
|
|
|
|
|
remapped <- renv_json_remap(json, map)
|
|
|
|
|
|
|
|
|
|
# evaluate
|
|
|
|
|
eval(remapped, envir = baseenv())
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
renv_json_remap <- function(json, map) {
|
|
|
|
|
|
|
|
|
|
# fix names
|
|
|
|
|
if (!is.null(names(json))) {
|
|
|
|
|
lhs <- match(names(json), names(map), nomatch = 0L)
|
|
|
|
|
rhs <- match(names(map), names(json), nomatch = 0L)
|
|
|
|
|
names(json)[rhs] <- map[lhs]
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
# fix values
|
|
|
|
|
if (is.character(json))
|
|
|
|
|
return(map[[json]] %||% json)
|
|
|
|
|
|
|
|
|
|
# handle true, false, null
|
|
|
|
|
if (is.name(json)) {
|
|
|
|
|
text <- as.character(json)
|
|
|
|
|
if (text == "true")
|
|
|
|
|
return(TRUE)
|
|
|
|
|
else if (text == "false")
|
|
|
|
|
return(FALSE)
|
|
|
|
|
else if (text == "null")
|
|
|
|
|
return(NULL)
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
# recurse
|
|
|
|
|
if (is.recursive(json)) {
|
|
|
|
|
for (i in seq_along(json)) {
|
|
|
|
|
json[i] <- list(renv_json_remap(json[[i]], map))
|
|
|
|
|
}
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
json
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
# load the renv profile, if any
|
|
|
|
|
renv_bootstrap_profile_load(project)
|
|
|
|
|
|
|
|
|
|
# construct path to library root
|
|
|
|
|
root <- renv_bootstrap_library_root(project)
|
|
|
|
|
|
|
|
|
|
# construct library prefix for platform
|
|
|
|
|
prefix <- renv_bootstrap_platform_prefix()
|
|
|
|
|
|
|
|
|
|
# construct full libpath
|
|
|
|
|
libpath <- file.path(root, prefix)
|
|
|
|
|
|
|
|
|
|
# attempt to load
|
|
|
|
|
if (renv_bootstrap_load(project, libpath, version))
|
|
|
|
|
return(TRUE)
|
|
|
|
|
|
|
|
|
|
# load failed; inform user we're about to bootstrap
|
|
|
|
|
prefix <- paste("# Bootstrapping renv", version)
|
|
|
|
|
postfix <- paste(rep.int("-", 77L - nchar(prefix)), collapse = "")
|
|
|
|
|
header <- paste(prefix, postfix)
|
|
|
|
|
message(header)
|
|
|
|
|
|
|
|
|
|
# perform bootstrap
|
|
|
|
|
bootstrap(version, libpath)
|
|
|
|
|
|
|
|
|
|
# exit early if we're just testing bootstrap
|
|
|
|
|
if (!is.na(Sys.getenv("RENV_BOOTSTRAP_INSTALL_ONLY", unset = NA)))
|
|
|
|
|
return(TRUE)
|
|
|
|
|
|
|
|
|
|
# try again to load
|
|
|
|
|
if (requireNamespace("renv", lib.loc = libpath, quietly = TRUE)) {
|
|
|
|
|
message("* Successfully installed and loaded renv ", version, ".")
|
|
|
|
|
return(renv::load())
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
# failed to download or load renv; warn the user
|
|
|
|
|
msg <- c(
|
|
|
|
|
"Failed to find an renv installation: the project will not be loaded.",
|
|
|
|
|
"Use `renv::activate()` to re-initialize the project."
|
|
|
|
|
)
|
|
|
|
|
|
|
|
|
|
warning(paste(msg, collapse = "\n"), call. = FALSE)
|
|
|
|
|
|
|
|
|
|
})
|
Carlos R. Mercado